Characterizing self-similarity in bacteria DNA sequences
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چکیده
منابع مشابه
Self-Similarity Limits of Genomic Signatures
It is shown that metric representation of DNA sequences is one-to-one. By using the metric representation method, suppression of nucleotide strings in the DNA sequences is determined. For a DNA sequence, an optimal string length to display genomic signature in chaos game representation is obtained by eliminating effects of the finite sequence. The optimal string length is further shown as a sel...
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Intermittent density fluctuations of nucleotide molecules (adenine, guanine, cytosine and thymine) along DNA sequences are studied in the framework of a hierarchical structure (HS) model originally proposed for the study of fully developed turbulence [She and Lévêque, Phys. Rev. Lett. 72, 336 (1994)]. Large scale (10 ≤ l ≤ 10 bp) base density fluctuation is shown to satisfy the HS similarity. T...
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تاریخ انتشار 2017